Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920426.1_cds_XP_016469548.1_62084
CDS Infomation

[gene=LOC107791914] [db_xref=GeneID:107791914] [protein=probable polyamine oxidase 5] [protein_id=XP_016469548.1] [location=complement(26294..27895)] [gbkey=CDS]
Sequence

ATGGTGACCAAGAAACCAAAAGTAGTGATAATAGGGGCAGGAATGGCAGGTATTACAGCA
GCTAACAAGCTGTACATAGCTGCAGGCTCTAAACAATTGTTAGAGCTGTGTGTTGTGGAG
GGTGGTAATAGGATTGGTGGAAGGATTAAGACCTCAGAGTTTGGTGGCAGAAGGATTGAA
ATGGGTGCTACTTGGATCCATGGAATTGGGGGTAGCCCTGTTTACAAGATTGCTCAGGAG
ATTAACTCACTGGAATCACACCAGCCTTGGGAGTGTATGGATGAGTTCTTGGATGAGCCA
TTGACTATTGCTGAAGGAGGACATGACCTCAATTCTTCCATTGTTGAGCCCATATCCAAT
CTTTTCAAGAAGCTCATGGATTTTGCTCAGGGGAAGGCTATTGAAGATGGTGTGTGCAGT
GAATTTGCTCAAAGTTACAGATCCTCCAATGAGAATCTCAGTGTTGGTTCTTTCCTAAGG
AAAGGGCTTGATGCTTATTGGGATTCAATGAAGGACCAAGAGGGAATTGATAACTGGAGC
AGAAAATCATTGGAGGATGGCATTTTTGCAATGCTTGAGAACACACAAAGGACTTACACA
TCAGCTGGTGATTTGCACACTCTAGATTTCAATGCAGAAAGTGAATATCGTATGTTTCCT
GGGAAGGAGATAACCATTGCCAAAGGCTACTCTACTATAGTTGAATCTTTGGCATCTGTT
CTGCCAGCTGGTTTGATTCAATTAGGCCGAAAGGTCACCAGAATTGAATGGCAGCCTGAT
GATGGTGGTCACCACAAACCATTAGATGTCGAAAATGGCAATGATACTAAGCCAGTAAAG
CTACATTTTTATGATGGGTCAGTCATGTATGCTGATCATGTCATTGTCACAGTCTCACTT
GGGGTTCTAAAACGAGAGATTCGCGATGATTCTGGTATGTTTAGTCCTCCACTTCCTAGT
TTTAAGACTCAGGCAATCTCAAGGCTTGGTTTTGGTGTTGTCAACAAGCTATTCTTGCAA
TTAAGTCCAACCAAAGATGAAGATGCCATGAAGTTCCCATACTTGCAGATGGTCTTTCAT
CAGTCAGACTCAAAACTAAGGCATCCAAAAATCCCCTGGTGGATGAGGAGGACAGCTTCT
TTATGTCCAATCTATGGCAGCTCAAATGTTCTATTATCATGGTTTGCAGGTGCAGAGGCT
CTTGAACTTGAATCTCTTGATAACGAAGAGATCGTTGATGGCTTTTCGACAATGATCTCC
GATTTCCTAGTAAACTCAAAGCATCTAAACAAGTTGTGCAATGGGCATGCAGAAAGTTGT
TTCAAATTTGATAAGGTTTTAAAGAGTCAATGGGGTACTGATCCACTCTTCTTGGGGTCA
TATAGTTATGTAGCAGTTGGATCAAGTGGAGATGATTTGGATACTATGGCTGAGCCATTG
CCAAAAAGGAGCAATTATAGTTGTATTTCCCCTCCACTTCAAATTTTATTTGCAGGGGAA
GCAACACATAGAACCCATTATTCAACAACTCATGGTGCTTATTTTAGTGGCCTAAGAGAA
GCCAATAGGCTCCTTCAGCACTATCACTGTATTGATATATGA

Peptide Sequence

PEP ID

XP_016469548.1
PEP Infomation

PREDICTED: probable polyamine oxidase 5 [Nicotiana tabacum]
Sequence

MVTKKPKVVIIGAGMAGITAANKLYIAAGSKQLLELCVVEGGNRIGGRIKTSEFGGRRIE
MGATWIHGIGGSPVYKIAQEINSLESHQPWECMDEFLDEPLTIAEGGHDLNSSIVEPISN
LFKKLMDFAQGKAIEDGVCSEFAQSYRSSNENLSVGSFLRKGLDAYWDSMKDQEGIDNWS
RKSLEDGIFAMLENTQRTYTSAGDLHTLDFNAESEYRMFPGKEITIAKGYSTIVESLASV
LPAGLIQLGRKVTRIEWQPDDGGHHKPLDVENGNDTKPVKLHFYDGSVMYADHVIVTVSL
GVLKREIRDDSGMFSPPLPSFKTQAISRLGFGVVNKLFLQLSPTKDEDAMKFPYLQMVFH
QSDSKLRHPKIPWWMRRTASLCPIYGSSNVLLSWFAGAEALELESLDNEEIVDGFSTMIS
DFLVNSKHLNKLCNGHAESCFKFDKVLKSQWGTDPLFLGSYSYVAVGSSGDDLDTMAEPL
PKRSNYSCISPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCIDI

Transcript Sequence

Gene sequence data has not been registered.